Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm26137-201ENSMUST00000116701 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm26190-201ENSMUST00000116704 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm24617-201ENSMUST00000116705 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm25778-201ENSMUST00000116713 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm25774-201ENSMUST00000116717 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm22102-201ENSMUST00000116730 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23177-201ENSMUST00000116784 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm24193-201ENSMUST00000116801 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm24744-201ENSMUST00000116833 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm24427-201ENSMUST00000116896 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm22346-201ENSMUST00000116918 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23606-201ENSMUST00000116938 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm22029-201ENSMUST00000116940 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm26298-201ENSMUST00000116956 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23844-201ENSMUST00000116959 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm24484-201ENSMUST00000117009 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm25347-201ENSMUST00000117026 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm22112-201ENSMUST00000117032 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm15670-201ENSMUST00000117740 447 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23331-201ENSMUST00000157423 108 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23534-201ENSMUST00000157539 97 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23536-201ENSMUST00000157541 134 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23644-201ENSMUST00000157856 77 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm22804-201ENSMUST00000158052 101 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Mir5098-201ENSMUST00000175320 82 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm22991-201ENSMUST00000178126 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm25754-201ENSMUST00000178653 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm22419-201ENSMUST00000178780 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm24802-201ENSMUST00000178897 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm25208-201ENSMUST00000178964 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm24567-201ENSMUST00000179294 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23943-201ENSMUST00000179712 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm25228-201ENSMUST00000180121 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm23304-201ENSMUST00000180209 121 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm27477-201ENSMUST00000184649 143 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm28755-201ENSMUST00000185773 199 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm4644-201ENSMUST00000197587 400 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm44338-201ENSMUST00000198614 110 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 n-R5s170-201ENSMUST00000083726 113 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 n-R5s13-201ENSMUST00000093707 119 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm31258-201ENSMUST00000194532 3297 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm37174-201ENSMUST00000194699 3058 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm44250-201ENSMUST00000203092 4229 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hoxd3P09027 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm44518-201ENSMUST00000208080 4370 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm37400-201ENSMUST00000193148 3605 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm24282-201ENSMUST00000104232 66 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm12926-201ENSMUST00000121158 409 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm24690-201ENSMUST00000157759 97 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm23700-201ENSMUST00000158842 102 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm29104-201ENSMUST00000186304 222 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm29610-201ENSMUST00000187749 453 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm43563-201ENSMUST00000196761 198 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm17775-201ENSMUST00000198542 258 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm42428-201ENSMUST00000198677 302 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm42774-201ENSMUST00000198854 283 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm42814-201ENSMUST00000199370 460 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm18441-201ENSMUST00000223539 617 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm23626-201ENSMUST00000082458 133 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm25895-201ENSMUST00000083714 100 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm43010-201ENSMUST00000195993 2878 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.93□□□□□ -1.78
Hoxd3P09027 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hoxd3P09027 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms