Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Mir6394-201ENSMUST00000184738 99 ntBASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm28647-201ENSMUST00000188416 197 ntBASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm44609-201ENSMUST00000207157 460 ntBASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Mir448-201ENSMUST00000083516 112 ntBASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm14751-201ENSMUST00000117693 222 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm21990-201ENSMUST00000124692 383 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm12238-201ENSMUST00000127764 124 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm17062-201ENSMUST00000166987 461 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm37523-201ENSMUST00000194901 412 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm44478-201ENSMUST00000204875 114 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm45365-201ENSMUST00000209489 256 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Mir211-201ENSMUST00000083651 106 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Gm19335-201ENSMUST00000195836 2069 ntBASIC1.85□□□□□ -2.11
Cpsf1Q9EPU4 Mir1954-201ENSMUST00000175595 86 ntBASIC1.84□□□□□ -2.11
Cpsf1Q9EPU4 Gm26915-201ENSMUST00000183080 748 ntBASIC1.84□□□□□ -2.11
Cpsf1Q9EPU4 Gm43578-201ENSMUST00000201250 459 ntBASIC1.84□□□□□ -2.11
Cpsf1Q9EPU4 Gm24151-201ENSMUST00000082758 141 ntBASIC1.84□□□□□ -2.11
Cpsf1Q9EPU4 Mir200b-201ENSMUST00000083615 70 ntBASIC1.84□□□□□ -2.11
Cpsf1Q9EPU4 Gm15125-201ENSMUST00000116185 800 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 U6.1-201ENSMUST00000157443 101 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm24222-201ENSMUST00000158834 93 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm20534-201ENSMUST00000172957 172 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Mir6985-201ENSMUST00000184641 61 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm12006-201ENSMUST00000120786 403 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm25044-201ENSMUST00000158603 104 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm20526-201ENSMUST00000173416 158 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm25409-201ENSMUST00000083764 131 ntBASIC1.83□□□□□ -2.12
Cpsf1Q9EPU4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm22516-201ENSMUST00000158266 124 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm26029-201ENSMUST00000158659 132 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm5277-201ENSMUST00000164923 556 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm9068-201ENSMUST00000217393 455 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm7065-201ENSMUST00000222150 474 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm23850-201ENSMUST00000083830 169 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm16261-201ENSMUST00000096813 205 ntBASIC1.82□□□□□ -2.12
Cpsf1Q9EPU4 Gm22003-201ENSMUST00000101885 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm15067-201ENSMUST00000119534 156 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm23760-201ENSMUST00000158350 116 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24551-201ENSMUST00000158645 92 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24540-201ENSMUST00000177627 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm25256-201ENSMUST00000177746 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm22822-201ENSMUST00000177941 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Rnu6-201ENSMUST00000178023 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24753-201ENSMUST00000178183 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm25829-201ENSMUST00000178275 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm22092-201ENSMUST00000178290 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24486-201ENSMUST00000178420 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm23217-201ENSMUST00000178482 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm26465-201ENSMUST00000178517 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm23092-201ENSMUST00000178688 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm23269-201ENSMUST00000178701 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm25709-201ENSMUST00000178844 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm25547-201ENSMUST00000178877 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24722-201ENSMUST00000179017 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm22969-201ENSMUST00000179018 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm22129-201ENSMUST00000179034 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24873-201ENSMUST00000179101 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm23934-201ENSMUST00000179111 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm25021-201ENSMUST00000179184 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm22623-201ENSMUST00000179244 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm25737-201ENSMUST00000179274 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm22618-201ENSMUST00000179376 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24182-201ENSMUST00000179419 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24242-201ENSMUST00000179440 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm25064-201ENSMUST00000179535 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm26295-201ENSMUST00000179690 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm24424-201ENSMUST00000179714 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm22823-201ENSMUST00000179754 107 ntBASIC1.81□□□□□ -2.12
Cpsf1Q9EPU4 Gm22360-201ENSMUST00000179775 107 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms