Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm16218-201ENSMUST00000155424 388 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.74□□□□□ -1.65
Clp1Q99LI9 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Clp1Q99LI9 Mir7661-201ENSMUST00000197023 61 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Mir129b-201ENSMUST00000197461 65 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Gm43583-201ENSMUST00000199235 303 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Gm43600-201ENSMUST00000202134 223 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.74□□□□□ -1.65
Clp1Q99LI9 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Clp1Q99LI9 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Gm26225-201ENSMUST00000082508 135 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Gm22571-201ENSMUST00000082984 70 ntBASIC4.74□□□□□ -1.65
Clp1Q99LI9 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
Clp1Q99LI9 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.74□□□□□ -1.65
Clp1Q99LI9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Clp1Q99LI9 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Clp1Q99LI9 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Clp1Q99LI9 AC102369.2-201ENSMUST00000219725 1679 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Clp1Q99LI9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm13567-201ENSMUST00000118026 247 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm12771-201ENSMUST00000120246 135 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm5391-201ENSMUST00000121155 613 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm11931-201ENSMUST00000121630 447 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm22453-201ENSMUST00000122801 318 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm44977-201ENSMUST00000205283 420 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm5175-202ENSMUST00000219699 529 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm46998-201ENSMUST00000221444 330 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm23454-201ENSMUST00000083332 133 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.73□□□□□ -1.65
Clp1Q99LI9 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.73□□□□□ -1.65
Clp1Q99LI9 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm26075-201ENSMUST00000104062 121 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm24172-201ENSMUST00000104127 117 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Mir879-201ENSMUST00000104703 76 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm11874-201ENSMUST00000117437 130 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm15022-201ENSMUST00000122074 746 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm2182-201ENSMUST00000145243 663 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm22654-201ENSMUST00000157874 105 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm18520-201ENSMUST00000174783 658 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Mir7047-201ENSMUST00000184595 64 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.72□□□□□ -1.65
Clp1Q99LI9 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clp1Q99LI9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm26457-201ENSMUST00000082678 78 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm25818-201ENSMUST00000083282 164 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.72□□□□□ -1.65
Clp1Q99LI9 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Clp1Q99LI9 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Clp1Q99LI9 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Clp1Q99LI9 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Clp1Q99LI9 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Clp1Q99LI9 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Clp1Q99LI9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm25420-201ENSMUST00000104216 127 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm11398-201ENSMUST00000120330 320 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm15263-201ENSMUST00000121556 642 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm24629-201ENSMUST00000122762 89 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm23196-201ENSMUST00000158806 107 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm24949-201ENSMUST00000183609 215 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm28744-201ENSMUST00000189939 340 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm37881-201ENSMUST00000193001 421 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm45380-201ENSMUST00000210465 315 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm5548-201ENSMUST00000055878 397 ntBASIC4.71□□□□□ -1.66
Clp1Q99LI9 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms