Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm23464-201ENSMUST00000083145 147 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm24121-201ENSMUST00000102029 106 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm23709-201ENSMUST00000104364 130 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm10552-201ENSMUST00000113396 372 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm14500-201ENSMUST00000121647 113 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm14581-201ENSMUST00000121726 198 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm5123-201ENSMUST00000121905 837 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm10059-201ENSMUST00000131139 171 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm5755-201ENSMUST00000152394 837 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm25720-201ENSMUST00000157503 105 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm25664-201ENSMUST00000157697 107 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm24751-201ENSMUST00000157844 102 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm17951-201ENSMUST00000198536 496 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 Neat1-201ENSMUST00000173672 20771 ntBASIC4.45□□□□□ -1.7
Sh3rf1Q69ZI1 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Snord66-201ENSMUST00000104051 75 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm15037-201ENSMUST00000120358 259 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm5379-201ENSMUST00000120973 826 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm26479-201ENSMUST00000122620 106 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm28020-201ENSMUST00000157739 67 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Spin2g-201ENSMUST00000178425 687 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm26701-201ENSMUST00000181571 234 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm27465-201ENSMUST00000184290 91 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm43402-201ENSMUST00000197159 159 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm44391-201ENSMUST00000198490 93 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm25203-202ENSMUST00000200458 216 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm18462-201ENSMUST00000208112 417 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm25203-201ENSMUST00000082842 215 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Mir346-201ENSMUST00000083547 98 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 BC051076-202ENSMUST00000199477 2868 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Sh3rf1Q69ZI1 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Mir761-201ENSMUST00000103245 76 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm4916-201ENSMUST00000126139 642 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm26287-201ENSMUST00000158887 81 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Nron-204ENSMUST00000158971 370 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm17052-201ENSMUST00000165496 289 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Mir6414-201ENSMUST00000183685 82 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm27414-201ENSMUST00000185033 381 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm36946-201ENSMUST00000192706 435 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm44474-201ENSMUST00000196525 127 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm44054-201ENSMUST00000203814 372 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm19366-201ENSMUST00000206996 156 ntBASIC4.43□□□□□ -1.7
Sh3rf1Q69ZI1 Gm9795-201ENSMUST00000062156 693 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms