Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.97□□□□□ -2.09
Scn9aQ62205 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC1.97□□□□□ -2.09
Scn9aQ62205 Gm23053-201ENSMUST00000175136 96 ntBASIC1.97□□□□□ -2.09
Scn9aQ62205 Gm28383-201ENSMUST00000187563 139 ntBASIC1.97□□□□□ -2.09
Scn9aQ62205 Gm29262-201ENSMUST00000190084 196 ntBASIC1.97□□□□□ -2.09
Scn9aQ62205 Gm43431-201ENSMUST00000198577 340 ntBASIC1.97□□□□□ -2.09
Scn9aQ62205 Gm45034-201ENSMUST00000206831 482 ntBASIC1.97□□□□□ -2.09
Scn9aQ62205 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.97□□□□□ -2.09
Scn9aQ62205 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC1.97□□□□□ -2.09
Scn9aQ62205 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
Scn9aQ62205 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Scn9aQ62205 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm23033-201ENSMUST00000157996 134 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Nron-204ENSMUST00000158971 370 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm6113-201ENSMUST00000180319 639 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm20915-201ENSMUST00000191575 663 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm15235-201ENSMUST00000200572 194 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 AC125531.1-201ENSMUST00000219849 221 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm6429-201ENSMUST00000117144 475 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm5937-201ENSMUST00000119715 643 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm26181-201ENSMUST00000157687 106 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Scn9aQ62205 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Scn9aQ62205 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Scn9aQ62205 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.96□□□□□ -2.1
Scn9aQ62205 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Scn9aQ62205 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Scn9aQ62205 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm15001-201ENSMUST00000117657 795 ntBASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm13510-201ENSMUST00000118659 429 ntBASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm12512-201ENSMUST00000119620 217 ntBASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm6591-201ENSMUST00000121063 434 ntBASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm23813-201ENSMUST00000175153 77 ntBASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.95□□□□□ -2.1
Scn9aQ62205 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm29815-201ENSMUST00000202418 178 ntBASIC1.95□□□□□ -2.1
Scn9aQ62205 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC1.95□□□□□ -2.1
Scn9aQ62205 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.95□□□□□ -2.1
Scn9aQ62205 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Scn9aQ62205 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Scn9aQ62205 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.94□□□□□ -2.1
Scn9aQ62205 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm22225-201ENSMUST00000157358 278 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm26915-201ENSMUST00000183080 748 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm43193-201ENSMUST00000197732 441 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm20304-201ENSMUST00000218168 444 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Mir423-201ENSMUST00000083584 109 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm12765-201ENSMUST00000117273 615 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm25279-201ENSMUST00000122608 133 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm25958-201ENSMUST00000175114 71 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Npn2-202ENSMUST00000189275 235 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm6801-201ENSMUST00000190697 339 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm44348-201ENSMUST00000200165 122 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Gm22353-201ENSMUST00000083918 136 ntBASIC1.94□□□□□ -2.1
Scn9aQ62205 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Scn9aQ62205 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm22019-201ENSMUST00000104359 96 ntBASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm11438-201ENSMUST00000121582 189 ntBASIC1.93□□□□□ -2.1
Scn9aQ62205 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm24783-201ENSMUST00000157639 100 ntBASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm24770-201ENSMUST00000158505 92 ntBASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.93□□□□□ -2.1
Scn9aQ62205 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm44332-201ENSMUST00000203712 433 ntBASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm44520-201ENSMUST00000205447 802 ntBASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm45316-201ENSMUST00000210128 162 ntBASIC1.93□□□□□ -2.1
Scn9aQ62205 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Scn9aQ62205 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Scn9aQ62205 Gm13714-201ENSMUST00000117313 221 ntBASIC1.92□□□□□ -2.1
Scn9aQ62205 Gm25976-201ENSMUST00000158695 130 ntBASIC1.92□□□□□ -2.1
Scn9aQ62205 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Scn9aQ62205 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.92□□□□□ -2.1
Scn9aQ62205 Gm19457-201ENSMUST00000200995 448 ntBASIC1.92□□□□□ -2.1
Scn9aQ62205 Gm42960-201ENSMUST00000202160 241 ntBASIC1.92□□□□□ -2.1
Scn9aQ62205 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.92□□□□□ -2.1
Scn9aQ62205 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC1.92□□□□□ -2.1
Scn9aQ62205 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
Scn9aQ62205 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.92□□□□□ -2.1
Scn9aQ62205 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Scn9aQ62205 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC1.92□□□□□ -2.1
Scn9aQ62205 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Scn9aQ62205 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.92□□□□□ -2.1
Scn9aQ62205 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms