Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm11356-201ENSMUST00000118974 192 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm12044-201ENSMUST00000120335 213 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm26424-201ENSMUST00000122530 104 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm2020-201ENSMUST00000145242 579 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm26277-201ENSMUST00000157097 152 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm25866-201ENSMUST00000158245 112 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm16588-201ENSMUST00000162889 355 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm20450-201ENSMUST00000173652 147 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm38044-201ENSMUST00000192964 487 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm37533-201ENSMUST00000193848 545 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm43026-201ENSMUST00000202972 325 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm44657-201ENSMUST00000208568 450 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm46193-201ENSMUST00000219399 364 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm5374-201ENSMUST00000222868 657 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Mir19a-201ENSMUST00000083482 82 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.25□□□□□ -2.05
Trav6-2Q5R1I4 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Mir582-201ENSMUST00000103758 81 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm12954-201ENSMUST00000118610 611 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm11357-201ENSMUST00000119758 954 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm25102-201ENSMUST00000122479 112 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm24771-201ENSMUST00000158508 137 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm22666-201ENSMUST00000158717 164 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm23145-201ENSMUST00000178912 79 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Mir6541-201ENSMUST00000183649 110 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm19641-201ENSMUST00000188432 417 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm8747-201ENSMUST00000195392 751 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm18982-201ENSMUST00000198118 529 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm19147-201ENSMUST00000199622 652 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Gm25404-201ENSMUST00000082970 107 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Trav6-2Q5R1I4 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm11784-201ENSMUST00000118568 474 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm11813-201ENSMUST00000118586 291 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm15113-201ENSMUST00000119280 836 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm13341-201ENSMUST00000120780 672 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm25107-201ENSMUST00000122472 129 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm23886-201ENSMUST00000122684 313 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm26101-201ENSMUST00000157246 105 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm24532-201ENSMUST00000157951 286 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Mir5129-201ENSMUST00000174938 78 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Mir8106-201ENSMUST00000184520 139 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm27369-201ENSMUST00000185182 71 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm28283-201ENSMUST00000185509 178 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm43652-201ENSMUST00000196219 675 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm43239-201ENSMUST00000200131 201 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm42857-201ENSMUST00000200823 339 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm29817-201ENSMUST00000210098 172 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm26055-201ENSMUST00000083038 107 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.23□□□□□ -2.05
Trav6-2Q5R1I4 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms