Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rnf40Q3U319 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm25136-201ENSMUST00000083253 115 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Mir133a-2-201ENSMUST00000083526 104 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm22576-201ENSMUST00000083733 104 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm37296-201ENSMUST00000192728 2922 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Mdga2-203ENSMUST00000113942 423 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Mir1298-201ENSMUST00000116681 98 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm12982-201ENSMUST00000117408 190 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm13491-201ENSMUST00000118267 235 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm22225-201ENSMUST00000157358 278 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm25424-201ENSMUST00000157612 58 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm24179-201ENSMUST00000158925 127 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm2862-201ENSMUST00000161524 328 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm20401-201ENSMUST00000173717 212 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Mir7211-201ENSMUST00000184071 63 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Mir7008-201ENSMUST00000184398 63 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm27679-201ENSMUST00000184612 84 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm44052-201ENSMUST00000203382 396 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.22□□□□□ -1.57
Rnf40Q3U319 mt-Tf-201ENSMUST00000082387 68 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Gm23508-201ENSMUST00000083079 72 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.22□□□□□ -1.57
Rnf40Q3U319 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC5.21□□□□□ -1.57
Rnf40Q3U319 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Rnf40Q3U319 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.21□□□□□ -1.57
Rnf40Q3U319 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Rnf40Q3U319 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Rnf40Q3U319 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm22373-201ENSMUST00000104584 89 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm12954-201ENSMUST00000118610 611 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm12238-201ENSMUST00000127764 124 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm14947-201ENSMUST00000133704 303 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm24719-201ENSMUST00000157520 110 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm24717-201ENSMUST00000157522 124 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm25606-201ENSMUST00000158363 95 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm26200-201ENSMUST00000180273 79 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm28848-201ENSMUST00000189984 168 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm43304-201ENSMUST00000196803 326 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm7117-201ENSMUST00000071515 387 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm26330-201ENSMUST00000082817 104 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf40Q3U319 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC5.21□□□□□ -1.58
Rnf40Q3U319 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rnf40Q3U319 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rnf40Q3U319 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm22453-201ENSMUST00000122801 318 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm23196-201ENSMUST00000158806 107 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm23337-201ENSMUST00000158959 118 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm37681-201ENSMUST00000193880 727 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm43563-201ENSMUST00000196761 198 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm44349-201ENSMUST00000197048 123 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm43078-201ENSMUST00000197222 168 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm4644-201ENSMUST00000197587 400 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Mir409-201ENSMUST00000198153 79 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Trav5-2-201ENSMUST00000199855 280 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rnf40Q3U319 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.2□□□□□ -1.58
Rnf40Q3U319 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms