Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm3829-201ENSMUST00000222362 619 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm5955-201ENSMUST00000222712 219 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm23406-201ENSMUST00000082537 122 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm25929-201ENSMUST00000082784 107 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm25272-201ENSMUST00000104293 128 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm12646-201ENSMUST00000119144 238 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm14647-201ENSMUST00000119392 680 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm13717-201ENSMUST00000119868 365 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm12691-201ENSMUST00000120186 456 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm11556-201ENSMUST00000120751 288 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm14049-201ENSMUST00000121009 636 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm8207-201ENSMUST00000171204 502 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Mir3112-201ENSMUST00000175431 82 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm22290-201ENSMUST00000177655 107 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm22583-201ENSMUST00000178031 107 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm25156-201ENSMUST00000179809 79 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm27999-201ENSMUST00000183539 193 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm27189-201ENSMUST00000184119 190 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm19202-201ENSMUST00000198096 808 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm44059-201ENSMUST00000204048 351 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm25401-201ENSMUST00000082975 106 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm10242-201ENSMUST00000090064 330 ntBASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col28a1Q2UY11 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm22115-201ENSMUST00000103976 133 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm23923-201ENSMUST00000104108 133 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm22497-201ENSMUST00000104499 131 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm11221-201ENSMUST00000117230 597 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm7164-201ENSMUST00000117503 450 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm14119-201ENSMUST00000119511 235 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm13557-201ENSMUST00000120771 382 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm14810-201ENSMUST00000121628 486 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm25967-201ENSMUST00000157168 147 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm24244-201ENSMUST00000157317 130 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm25369-201ENSMUST00000158848 132 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Mir5127-201ENSMUST00000175295 71 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm26430-201ENSMUST00000178054 107 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Mir6413-201ENSMUST00000184049 108 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm27694-201ENSMUST00000184740 86 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Mir6363-201ENSMUST00000184880 114 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm38044-201ENSMUST00000192964 487 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm19418-201ENSMUST00000197436 580 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm43214-201ENSMUST00000199242 352 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm44348-201ENSMUST00000200165 122 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm35876-201ENSMUST00000205044 459 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.43□□□□□ -1.86
Col28a1Q2UY11 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.43□□□□□ -1.86
Col28a1Q2UY11 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms