Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm26501-201ENSMUST00000178307 107 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm27585-201ENSMUST00000183717 199 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm27189-201ENSMUST00000184119 190 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a1Q04857 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm37050-201ENSMUST00000193464 466 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm44391-201ENSMUST00000198490 93 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm42453-201ENSMUST00000200477 409 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a1Q04857 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a1Q04857 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm26418-201ENSMUST00000104275 137 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm23836-201ENSMUST00000104434 129 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm15783-201ENSMUST00000117521 633 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm14627-201ENSMUST00000118931 567 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm14282-201ENSMUST00000119484 240 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm11600-201ENSMUST00000119592 240 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm14687-201ENSMUST00000120206 363 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm27723-201ENSMUST00000157398 63 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.67□□□□□ -1.66
Col6a1Q04857 Spin2g-201ENSMUST00000178425 687 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.67□□□□□ -1.66
Col6a1Q04857 Mir6346-201ENSMUST00000183982 81 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Mir195b-201ENSMUST00000184814 97 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm45296-201ENSMUST00000209625 205 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm39197-201ENSMUST00000212069 457 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.67□□□□□ -1.66
Col6a1Q04857 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.67□□□□□ -1.66
Col6a1Q04857 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a1Q04857 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a1Q04857 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a1Q04857 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Col6a1Q04857 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a1Q04857 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a1Q04857 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a1Q04857 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a1Q04857 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a1Q04857 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.67□□□□□ -1.66
Col6a1Q04857 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a1Q04857 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm14299-201ENSMUST00000117586 397 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm13386-201ENSMUST00000117677 124 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm14940-201ENSMUST00000119309 495 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm11384-201ENSMUST00000121376 303 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm4916-201ENSMUST00000126139 642 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm26036-201ENSMUST00000158149 144 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm22381-201ENSMUST00000158186 107 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm16545-201ENSMUST00000161968 463 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm24085-201ENSMUST00000175172 116 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm6214-201ENSMUST00000178845 541 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm27899-201ENSMUST00000184715 64 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm27457-201ENSMUST00000184771 156 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm27733-201ENSMUST00000184803 68 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm29408-201ENSMUST00000187536 216 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm29452-201ENSMUST00000187996 313 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm37791-201ENSMUST00000195081 286 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm45101-201ENSMUST00000208327 232 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm45815-201ENSMUST00000220241 146 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm26055-201ENSMUST00000083038 107 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a1Q04857 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.66□□□□□ -1.66
Col6a1Q04857 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Col6a1Q04857 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col6a1Q04857 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col6a1Q04857 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a1Q04857 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col6a1Q04857 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a1Q04857 Gm25764-201ENSMUST00000104092 134 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm24376-201ENSMUST00000104399 127 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm12173-201ENSMUST00000117622 273 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm25066-201ENSMUST00000158145 123 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm23365-201ENSMUST00000175019 125 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm25960-201ENSMUST00000175110 125 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm44453-201ENSMUST00000175161 126 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm25195-201ENSMUST00000177656 126 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm26928-201ENSMUST00000182674 572 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm29062-201ENSMUST00000186032 694 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms