Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm23466-201ENSMUST00000157133 106 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm23982-201ENSMUST00000157141 106 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm22447-201ENSMUST00000158155 92 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm3851-201ENSMUST00000168653 318 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm26983-201ENSMUST00000182051 388 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm28627-201ENSMUST00000186141 453 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm7182-201ENSMUST00000193351 732 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm44324-201ENSMUST00000198517 135 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Mir721-201ENSMUST00000200230 88 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm32536-201ENSMUST00000205209 445 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm45498-201ENSMUST00000210346 283 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm9818-201ENSMUST00000050900 255 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm10343-201ENSMUST00000096279 348 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd9P28357 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd9P28357 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd9P28357 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Hoxd9P28357 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.46□□□□□ -1.7
Hoxd9P28357 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd9P28357 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd9P28357 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd9P28357 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd9P28357 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Mir592-201ENSMUST00000102113 96 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Mir1193-201ENSMUST00000116761 121 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm13504-201ENSMUST00000117490 316 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm14880-201ENSMUST00000117581 292 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm15926-201ENSMUST00000120492 550 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm22217-201ENSMUST00000157556 313 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm22213-201ENSMUST00000157564 119 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm23781-201ENSMUST00000157940 308 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm7582-201ENSMUST00000160831 603 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm29005-201ENSMUST00000186773 320 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm43704-201ENSMUST00000196164 496 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Igkv1-108-201ENSMUST00000198926 298 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm44259-201ENSMUST00000204996 298 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm22062-201ENSMUST00000082563 107 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd9P28357 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd9P28357 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd9P28357 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.45□□□□□ -1.7
Hoxd9P28357 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd9P28357 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd9P28357 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd9P28357 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd9P28357 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm22003-201ENSMUST00000101885 107 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Mir690-201ENSMUST00000102110 109 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm11718-201ENSMUST00000119942 537 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm14810-201ENSMUST00000121628 486 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm25985-201ENSMUST00000122677 107 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm22531-201ENSMUST00000158819 140 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm17166-201ENSMUST00000172006 431 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm25457-201ENSMUST00000179509 107 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm22756-201ENSMUST00000180118 107 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm27245-201ENSMUST00000184385 376 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm29603-201ENSMUST00000186792 334 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm6651-201ENSMUST00000189471 271 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm28389-201ENSMUST00000190090 697 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm44208-201ENSMUST00000205199 421 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm26054-201ENSMUST00000083037 107 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm24492-201ENSMUST00000083798 107 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Gm24031-201ENSMUST00000083930 131 ntBASIC4.44□□□□□ -1.7
Hoxd9P28357 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd9P28357 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd9P28357 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms