Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm3681-201ENSMUST00000179940 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm27698-201ENSMUST00000184060 249 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm43489-201ENSMUST00000196810 993 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm42438-201ENSMUST00000197832 974 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm22353-201ENSMUST00000083918 136 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col1a1P11087 Mir343-201ENSMUST00000102360 75 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 Gm13273-201ENSMUST00000119737 159 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 Gm11965-201ENSMUST00000122017 277 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 Gm17946-201ENSMUST00000186856 538 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 Gm24624-201ENSMUST00000082617 164 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 Gm24611-201ENSMUST00000083272 107 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 Mir344-201ENSMUST00000083634 95 ntBASIC1.79□□□□□ -2.12
Col1a1P11087 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.78□□□□□ -2.12
Col1a1P11087 Gm26049-201ENSMUST00000157313 108 ntBASIC1.78□□□□□ -2.12
Col1a1P11087 Gm23329-201ENSMUST00000157415 108 ntBASIC1.78□□□□□ -2.12
Col1a1P11087 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
Col1a1P11087 Gm44458-201ENSMUST00000196594 143 ntBASIC1.78□□□□□ -2.12
Col1a1P11087 Gm18892-201ENSMUST00000217628 881 ntBASIC1.78□□□□□ -2.12
Col1a1P11087 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.78□□□□□ -2.12
Col1a1P11087 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Col1a1P11087 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Col1a1P11087 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col1a1P11087 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.78□□□□□ -2.12
Col1a1P11087 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col1a1P11087 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm22469-201ENSMUST00000104118 133 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm15526-201ENSMUST00000112504 204 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm14736-201ENSMUST00000121470 336 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm13409-201ENSMUST00000122072 546 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm23167-201ENSMUST00000157155 103 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm22563-201ENSMUST00000157333 269 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm23122-201ENSMUST00000157645 103 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm23558-201ENSMUST00000157823 80 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm23897-201ENSMUST00000158110 158 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm27493-201ENSMUST00000184128 78 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm27477-201ENSMUST00000184649 143 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col1a1P11087 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC1.77□□□□□ -2.13
Col1a1P11087 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.77□□□□□ -2.13
Col1a1P11087 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col1a1P11087 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col1a1P11087 Gm24406-201ENSMUST00000083026 128 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Gm7739-201ENSMUST00000221131 1560 ntBASIC1.77□□□□□ -2.13
Col1a1P11087 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col1a1P11087 Gm12351-201ENSMUST00000118727 292 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 Gm11357-201ENSMUST00000119758 954 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC1.76□□□□□ -2.13
Col1a1P11087 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.76□□□□□ -2.13
Col1a1P11087 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Col1a1P11087 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Col1a1P11087 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 Gm19280-201ENSMUST00000190191 205 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 Gm37281-201ENSMUST00000192412 439 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.76□□□□□ -2.13
Col1a1P11087 Gm44348-201ENSMUST00000200165 122 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
Col1a1P11087 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.76□□□□□ -2.13
Col1a1P11087 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.76□□□□□ -2.13
Col1a1P11087 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col1a1P11087 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col1a1P11087 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col1a1P11087 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Col1a1P11087 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm16363-201ENSMUST00000132460 877 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm22794-201ENSMUST00000157228 306 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm22843-201ENSMUST00000157710 134 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm24770-201ENSMUST00000158505 92 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm18354-201ENSMUST00000173515 1068 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Mir1954-201ENSMUST00000175595 86 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm27233-201ENSMUST00000184030 307 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.75□□□□□ -2.13
Col1a1P11087 Gm37418-201ENSMUST00000195031 274 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm18855-201ENSMUST00000206689 570 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Snord104-201ENSMUST00000083192 70 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col1a1P11087 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col1a1P11087 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Col1a1P11087 Gm14907-201ENSMUST00000121948 854 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm11819-201ENSMUST00000122192 372 ntBASIC1.75□□□□□ -2.13
Col1a1P11087 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Col1a1P11087 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.75□□□□□ -2.13
Col1a1P11087 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col1a1P11087 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
Col1a1P11087 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.75□□□□□ -2.13
Col1a1P11087 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col1a1P11087 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms