Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm37781-201ENSMUST00000194773 3218 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.77
Hoxd3P09027 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC3.96□□□□□ -1.78
Hoxd3P09027 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm25377-201ENSMUST00000104334 129 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm12683-201ENSMUST00000117528 415 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm15613-201ENSMUST00000118396 326 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm26027-201ENSMUST00000122725 268 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm24666-201ENSMUST00000158937 167 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm16546-201ENSMUST00000159442 355 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm27781-201ENSMUST00000185185 92 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm24948-201ENSMUST00000082866 207 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Snord15b-201ENSMUST00000083032 145 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
Hoxd3P09027 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 AC144772.1-201ENSMUST00000226372 2398 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Gm45853-201ENSMUST00000212310 3171 ntBASIC3.96□□□□□ -1.78
Hoxd3P09027 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd3P09027 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hoxd3P09027 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm6645-201ENSMUST00000118505 2726 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm15183-201ENSMUST00000118933 348 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm23260-201ENSMUST00000158317 172 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm23354-201ENSMUST00000158426 104 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm7241-201ENSMUST00000159853 357 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm22775-201ENSMUST00000177630 120 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm23569-201ENSMUST00000180120 120 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Mir6986-201ENSMUST00000184483 58 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm37923-201ENSMUST00000191624 161 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm8719-201ENSMUST00000203602 534 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm44583-201ENSMUST00000207478 281 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm5750-201ENSMUST00000218711 801 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 AC157515.1-201ENSMUST00000220953 450 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm9616-201ENSMUST00000221154 781 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Hoxd3P09027 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC3.95□□□□□ -1.78
Hoxd3P09027 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd3P09027 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd3P09027 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd3P09027 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm24578-201ENSMUST00000103970 129 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm22468-201ENSMUST00000116680 120 ntBASIC3.94□□□□□ -1.78
Hoxd3P09027 Gm26248-201ENSMUST00000116700 121 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms