Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm11460-201ENSMUST00000118200 361 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm13603-201ENSMUST00000119404 83 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm12880-201ENSMUST00000120652 494 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm14600-201ENSMUST00000121032 630 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm9001-201ENSMUST00000121642 399 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm24198-201ENSMUST00000157812 108 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm22716-201ENSMUST00000177596 107 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm23267-201ENSMUST00000178490 132 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col5a1O88207 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col5a1O88207 Gm27025-201ENSMUST00000182392 942 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC1.96□□□□□ -2.1
Col5a1O88207 Mir6352-201ENSMUST00000184495 116 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm18727-201ENSMUST00000185981 553 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC1.96□□□□□ -2.1
Col5a1O88207 Gm36966-201ENSMUST00000192217 413 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.96□□□□□ -2.1
Col5a1O88207 Mir7232-201ENSMUST00000197929 74 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm43406-201ENSMUST00000200356 334 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC1.96□□□□□ -2.1
Col5a1O88207 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC1.96□□□□□ -2.1
Col5a1O88207 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 AC156559.1-201ENSMUST00000224158 222 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col5a1O88207 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.96□□□□□ -2.1
Col5a1O88207 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col5a1O88207 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col5a1O88207 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col5a1O88207 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col5a1O88207 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Col5a1O88207 Gm24096-201ENSMUST00000103905 110 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm12639-201ENSMUST00000121400 493 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm13131-201ENSMUST00000122228 321 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.95□□□□□ -2.1
Col5a1O88207 Gm26280-201ENSMUST00000157096 101 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm3102-201ENSMUST00000164236 489 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm17064-201ENSMUST00000167690 452 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm15143-201ENSMUST00000178180 714 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm22897-201ENSMUST00000197860 128 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm43239-201ENSMUST00000200131 201 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC1.95□□□□□ -2.1
Col5a1O88207 Gm32300-201ENSMUST00000221735 515 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Col5a1O88207 Gm5670-201ENSMUST00000093546 372 ntBASIC1.95□□□□□ -2.1
Col5a1O88207 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Col5a1O88207 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm24098-201ENSMUST00000102075 109 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm25381-201ENSMUST00000102078 109 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm22673-201ENSMUST00000104415 131 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm12495-201ENSMUST00000119750 447 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm11430-201ENSMUST00000121317 217 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm9785-202ENSMUST00000144563 593 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm8121-201ENSMUST00000153583 499 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm25520-201ENSMUST00000158389 118 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm16326-201ENSMUST00000162843 414 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm23145-201ENSMUST00000178912 79 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm26365-201ENSMUST00000179177 94 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col5a1O88207 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm35212-201ENSMUST00000196672 606 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC1.94□□□□□ -2.1
Col5a1O88207 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col5a1O88207 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm26064-201ENSMUST00000083381 109 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
Col5a1O88207 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm8675-201ENSMUST00000201408 1856 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Col5a1O88207 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Col5a1O88207 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm15001-201ENSMUST00000117657 795 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm11358-201ENSMUST00000122310 373 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm18667-201ENSMUST00000186523 484 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm28650-201ENSMUST00000188413 411 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm37428-201ENSMUST00000193886 137 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Col5a1O88207 Gm44282-201ENSMUST00000203199 190 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Gm45658-201ENSMUST00000209197 580 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.94□□□□□ -2.1
Col5a1O88207 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col5a1O88207 Gm43201-201ENSMUST00000195925 3416 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm26080-201ENSMUST00000104069 131 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Mir466n-201ENSMUST00000104798 94 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms