Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm15760-201ENSMUST00000119553 283 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm11718-201ENSMUST00000119942 537 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm14875-201ENSMUST00000120881 319 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm27723-201ENSMUST00000157398 63 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm22348-201ENSMUST00000178674 79 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm29334-201ENSMUST00000190334 357 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm44349-201ENSMUST00000197048 123 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm45317-201ENSMUST00000210385 223 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm7093-201ENSMUST00000223004 581 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm24611-201ENSMUST00000083272 107 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Mir10a-201ENSMUST00000083585 110 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm24117-201ENSMUST00000103973 133 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm26019-201ENSMUST00000104407 119 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm14628-201ENSMUST00000117508 635 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm11398-201ENSMUST00000120330 320 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm23513-201ENSMUST00000158181 133 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm9687-201ENSMUST00000189312 602 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm9696-202ENSMUST00000191541 830 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm44583-201ENSMUST00000207478 281 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm2607-201ENSMUST00000212389 627 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.87□□□□□ -1.79
Pcdh1F7BJK1 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm15151-201ENSMUST00000117106 177 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm15560-201ENSMUST00000117107 643 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm13457-201ENSMUST00000117885 267 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm11785-201ENSMUST00000120165 601 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm15986-201ENSMUST00000122153 400 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm25278-201ENSMUST00000157267 120 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm20674-201ENSMUST00000177452 369 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm19503-201ENSMUST00000187109 241 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm37050-201ENSMUST00000193464 466 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm36259-201ENSMUST00000197340 392 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm45031-201ENSMUST00000206800 288 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm44844-201ENSMUST00000207242 336 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm17766-201ENSMUST00000209223 442 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm8274-201ENSMUST00000219820 463 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm25202-201ENSMUST00000082838 191 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Pcdh1F7BJK1 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms