Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.18□□□□□ -0.3
PdfS4R2K0 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.18□□□□□ -0.3
PdfS4R2K0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PdfS4R2K0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.18□□□□□ -0.3
PdfS4R2K0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.18□□□□□ -0.3
PdfS4R2K0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PdfS4R2K0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PdfS4R2K0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PdfS4R2K0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.17□□□□□ -0.3
PdfS4R2K0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PdfS4R2K0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PdfS4R2K0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.17□□□□□ -0.3
PdfS4R2K0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
PdfS4R2K0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.17□□□□□ -0.3
PdfS4R2K0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
PdfS4R2K0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.17□□□□□ -0.3
PdfS4R2K0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PdfS4R2K0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PdfS4R2K0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PdfS4R2K0 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.16□□□□□ -0.3
PdfS4R2K0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.16□□□□□ -0.3
PdfS4R2K0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.16□□□□□ -0.3
PdfS4R2K0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.16□□□□□ -0.3
PdfS4R2K0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PdfS4R2K0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PdfS4R2K0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.16□□□□□ -0.3
PdfS4R2K0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.16□□□□□ -0.3
PdfS4R2K0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PdfS4R2K0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.16□□□□□ -0.3
PdfS4R2K0 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.16□□□□□ -0.3
PdfS4R2K0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.15□□□□□ -0.3
PdfS4R2K0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.15□□□□□ -0.3
PdfS4R2K0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
PdfS4R2K0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.15□□□□□ -0.3
PdfS4R2K0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms