Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek4Q9Z1J2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek4Q9Z1J2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek4Q9Z1J2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Nek4Q9Z1J2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nek4Q9Z1J2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek4Q9Z1J2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek4Q9Z1J2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.89■□□□□ 0.93
Nek4Q9Z1J2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek4Q9Z1J2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek4Q9Z1J2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek4Q9Z1J2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek4Q9Z1J2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek4Q9Z1J2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek4Q9Z1J2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek4Q9Z1J2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Nek4Q9Z1J2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek4Q9Z1J2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nek4Q9Z1J2 Gm5643-201ENSMUST00000117081 966 ntBASIC20.85■□□□□ 0.93
Nek4Q9Z1J2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nek4Q9Z1J2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek4Q9Z1J2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek4Q9Z1J2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek4Q9Z1J2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek4Q9Z1J2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Gm29257-201ENSMUST00000186115 639 ntBASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek4Q9Z1J2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms