Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn9Q9Z0S7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Gm13168-201ENSMUST00000121771 632 ntBASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn9Q9Z0S7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn9Q9Z0S7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn9Q9Z0S7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms