Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm2399-201ENSMUST00000104944 225 ntBASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Cx3cr1Q9Z0D9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cr1Q9Z0D9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cr1Q9Z0D9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Zfp783-201ENSMUST00000095946 670 ntBASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Gm10493-201ENSMUST00000097270 612 ntBASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.52□□□□□ -0.09
Cx3cr1Q9Z0D9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cr1Q9Z0D9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cx3cr1Q9Z0D9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cr1Q9Z0D9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms