Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Gm27389-201ENSMUST00000183622 195 ntBASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn8aQ9WTU3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scn8aQ9WTU3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.27■□□□□ 0.35
Scn8aQ9WTU3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Gm13186-201ENSMUST00000118031 316 ntBASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Scn8aQ9WTU3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Mir770-201ENSMUST00000103252 94 ntBASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Gm44450-201ENSMUST00000199528 114 ntBASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn8aQ9WTU3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms