Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Gm7791-201ENSMUST00000219066 539 ntBASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col13a1Q9R1N9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Gm7638-201ENSMUST00000121348 967 ntBASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Mir1668-201ENSMUST00000184114 107 ntBASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Gm34391-201ENSMUST00000203706 907 ntBASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Gm4974-201ENSMUST00000209974 875 ntBASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Fst-202ENSMUST00000223640 2612 ntBASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Col13a1Q9R1N9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Gm11355-201ENSMUST00000121120 306 ntBASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Gm11950-201ENSMUST00000121615 838 ntBASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Gm7213-201ENSMUST00000215977 950 ntBASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.53□□□□□ -0.08
Col13a1Q9R1N9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col13a1Q9R1N9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms