Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp2Q9R061 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp2Q9R061 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp2Q9R061 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp2Q9R061 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp2Q9R061 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Nubp2Q9R061 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp2Q9R061 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Gm43183-201ENSMUST00000200632 547 ntBASIC15.2■□□□□ 0.02
Nubp2Q9R061 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.2■□□□□ 0.02
Nubp2Q9R061 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp2Q9R061 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.19■□□□□ 0.02
Nubp2Q9R061 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.19■□□□□ 0.02
Nubp2Q9R061 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.19■□□□□ 0.02
Nubp2Q9R061 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp2Q9R061 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.18■□□□□ 0.02
Nubp2Q9R061 Gm42545-201ENSMUST00000202755 922 ntBASIC15.18■□□□□ 0.02
Nubp2Q9R061 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nubp2Q9R061 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.17■□□□□ 0.02
Nubp2Q9R061 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.17■□□□□ 0.02
Nubp2Q9R061 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms