Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Gm13884-201ENSMUST00000118103 829 ntBASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Gm12895-201ENSMUST00000122214 226 ntBASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn5aQ9JJV9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Gm12644-201ENSMUST00000119935 606 ntBASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Gm44450-201ENSMUST00000199528 114 ntBASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn5aQ9JJV9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn5aQ9JJV9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.67■□□□□ 0.42
Scn5aQ9JJV9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Gm27525-201ENSMUST00000184465 107 ntBASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Gm2651-201ENSMUST00000203560 838 ntBASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn5aQ9JJV9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Gm43514-201ENSMUST00000198852 424 ntBASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.65■□□□□ 0.42
Scn5aQ9JJV9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms