Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rbfox1Q9JJ43 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbfox1Q9JJ43 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Gm13216-201ENSMUST00000117145 591 ntBASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rbfox1Q9JJ43 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbfox1Q9JJ43 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.58□□□□□ -0.07
Rbfox1Q9JJ43 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rbfox1Q9JJ43 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rbfox1Q9JJ43 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rbfox1Q9JJ43 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Gm13158-201ENSMUST00000122007 736 ntBASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Gm37179-201ENSMUST00000194862 823 ntBASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbfox1Q9JJ43 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms