Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm44314-201ENSMUST00000199263 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44394-201ENSMUST00000199558 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44484-201ENSMUST00000199873 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44466-201ENSMUST00000200264 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44359-201ENSMUST00000200671 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Rps4l-201ENSMUST00000071745 943 ntBASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cacna1fQ9JIS7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Gm29707-201ENSMUST00000196325 491 ntBASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cacna1fQ9JIS7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Gm13884-201ENSMUST00000118103 829 ntBASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1fQ9JIS7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1fQ9JIS7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1fQ9JIS7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1fQ9JIS7 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.45■□□□□ 0.7
Cacna1fQ9JIS7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.45■□□□□ 0.7
Cacna1fQ9JIS7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1fQ9JIS7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1fQ9JIS7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1fQ9JIS7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1fQ9JIS7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms