Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-4Q9EQM3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
Nkx2-4Q9EQM3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-4Q9EQM3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-4Q9EQM3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-4Q9EQM3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nkx2-4Q9EQM3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.58■□□□□ 0.4
Nkx2-4Q9EQM3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.58■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.58■□□□□ 0.4
Nkx2-4Q9EQM3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-4Q9EQM3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-4Q9EQM3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-4Q9EQM3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Gm27702-201ENSMUST00000184512 56 ntBASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-4Q9EQM3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Gm5264-201ENSMUST00000190584 848 ntBASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-4Q9EQM3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm12350-201ENSMUST00000121208 462 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44357-201ENSMUST00000195897 142 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm19658-201ENSMUST00000196231 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44367-201ENSMUST00000196836 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44350-201ENSMUST00000197197 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44390-201ENSMUST00000197533 144 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44313-201ENSMUST00000198018 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44486-201ENSMUST00000198508 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44454-201ENSMUST00000198541 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44314-201ENSMUST00000199263 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44394-201ENSMUST00000199558 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44484-201ENSMUST00000199873 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44466-201ENSMUST00000200264 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm44359-201ENSMUST00000200671 138 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-4Q9EQM3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Gm27867-201ENSMUST00000184778 125 ntBASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Gm10060-201ENSMUST00000212002 111 ntBASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms