Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Gm3375-201ENSMUST00000203929 796 ntBASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2aQ9DB34 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Chmp2aQ9DB34 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp2aQ9DB34 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp2aQ9DB34 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Gm38027-201ENSMUST00000192315 235 ntBASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2aQ9DB34 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Gm15565-201ENSMUST00000118890 427 ntBASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Odf3b-204ENSMUST00000227834 930 ntBASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Chmp2aQ9DB34 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Gm21814-202ENSMUST00000203277 873 ntBASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2aQ9DB34 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Gm30025-201ENSMUST00000218555 728 ntBASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chmp2aQ9DB34 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms