Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Gm29518-201ENSMUST00000190858 372 ntBASIC18.9■□□□□ 0.62
Rpap3Q9D706 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.9■□□□□ 0.62
Rpap3Q9D706 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Gm10819-201ENSMUST00000099988 561 ntBASIC18.9■□□□□ 0.62
Rpap3Q9D706 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.9■□□□□ 0.62
Rpap3Q9D706 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap3Q9D706 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rpap3Q9D706 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.88■□□□□ 0.61
Rpap3Q9D706 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Gm37722-201ENSMUST00000193757 208 ntBASIC18.88■□□□□ 0.61
Rpap3Q9D706 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap3Q9D706 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.88■□□□□ 0.61
Rpap3Q9D706 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.88■□□□□ 0.61
Rpap3Q9D706 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.87■□□□□ 0.61
Rpap3Q9D706 Gm17808-201ENSMUST00000200859 894 ntBASIC18.87■□□□□ 0.61
Rpap3Q9D706 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap3Q9D706 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Gm7284-201ENSMUST00000131667 944 ntBASIC18.86■□□□□ 0.61
Rpap3Q9D706 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Rpap3Q9D706 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.86■□□□□ 0.61
Rpap3Q9D706 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.86■□□□□ 0.61
Rpap3Q9D706 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap3Q9D706 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.86■□□□□ 0.61
Rpap3Q9D706 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.85■□□□□ 0.61
Rpap3Q9D706 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.85■□□□□ 0.61
Rpap3Q9D706 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rpap3Q9D706 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Rpap3Q9D706 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms