Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop56Q9D6Z1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop56Q9D6Z1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Mir8112-201ENSMUST00000184382 131 ntBASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Nop56Q9D6Z1 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.71■□□□□ 0.42
Nop56Q9D6Z1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nop56Q9D6Z1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nop56Q9D6Z1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nop56Q9D6Z1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Gm10493-201ENSMUST00000097270 612 ntBASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nop56Q9D6Z1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Gm10418-201ENSMUST00000100943 576 ntBASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nop56Q9D6Z1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms