Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snx29Q9D3S3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snx29Q9D3S3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snx29Q9D3S3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Snx29Q9D3S3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snx29Q9D3S3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snx29Q9D3S3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Snx29Q9D3S3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Gm34391-201ENSMUST00000203706 907 ntBASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Birc2-201ENSMUST00000054878 378 ntBASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.82■□□□□ 0.6
Snx29Q9D3S3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Phf7-203ENSMUST00000226565 1971 ntBASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx29Q9D3S3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Snx29Q9D3S3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx29Q9D3S3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Snx29Q9D3S3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx29Q9D3S3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx29Q9D3S3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx29Q9D3S3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Snx29Q9D3S3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx29Q9D3S3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms