Protein–RNA interactions for Protein: Q9D0F6

Rfc5, Replication factor C subunit 5, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc5Q9D0F6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc5Q9D0F6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Gm10013-201ENSMUST00000106074 672 ntBASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Gm18101-201ENSMUST00000215769 548 ntBASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc5Q9D0F6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc5Q9D0F6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Gm22697-201ENSMUST00000175194 63 ntBASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Mir1668-201ENSMUST00000184114 107 ntBASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc5Q9D0F6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.77■□□□□ 0.43
Rfc5Q9D0F6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Rfc5Q9D0F6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.77■□□□□ 0.43
Rfc5Q9D0F6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfc5Q9D0F6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfc5Q9D0F6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfc5Q9D0F6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Gm7213-201ENSMUST00000215977 950 ntBASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc5Q9D0F6 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc5Q9D0F6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rfc5Q9D0F6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms