Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Gm37025-201ENSMUST00000195159 829 ntBASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssbp3Q9D032 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Gm7638-201ENSMUST00000121348 967 ntBASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssbp3Q9D032 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssbp3Q9D032 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Gm10231-201ENSMUST00000181584 441 ntBASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Gm10175-202ENSMUST00000208752 441 ntBASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Gm18959-201ENSMUST00000208954 655 ntBASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.27□□□□□ -0.13
Ssbp3Q9D032 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Gm2274-201ENSMUST00000184539 609 ntBASIC14.26□□□□□ -0.13
Ssbp3Q9D032 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms