Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1lQ9CXF7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Chd1lQ9CXF7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd1lQ9CXF7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Gm10418-201ENSMUST00000100943 576 ntBASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd1lQ9CXF7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1lQ9CXF7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1lQ9CXF7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1lQ9CXF7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1lQ9CXF7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1lQ9CXF7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1lQ9CXF7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd1lQ9CXF7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Gm42778-201ENSMUST00000199644 553 ntBASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.39■□□□□ 0.69
Chd1lQ9CXF7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1lQ9CXF7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Mir2861-201ENSMUST00000175539 82 ntBASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1lQ9CXF7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms