Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ddx47Q9CWX9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx47Q9CWX9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx47Q9CWX9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx47Q9CWX9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx47Q9CWX9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ddx47Q9CWX9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ddx47Q9CWX9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx47Q9CWX9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx47Q9CWX9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx47Q9CWX9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx47Q9CWX9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx47Q9CWX9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx47Q9CWX9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms