Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm7Q9CQQ8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm7Q9CQQ8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm7Q9CQQ8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm7Q9CQQ8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm7Q9CQQ8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.33■□□□□ 0.37
Lsm7Q9CQQ8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.33■□□□□ 0.37
Lsm7Q9CQQ8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm7Q9CQQ8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Mir1668-201ENSMUST00000184114 107 ntBASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Gm7213-201ENSMUST00000215977 950 ntBASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Lsm7Q9CQQ8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm7Q9CQQ8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm7Q9CQQ8 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms