Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTRAFQ9CQE8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Gm12251-201ENSMUST00000117893 792 ntBASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTRAFQ9CQE8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Gm44544-201ENSMUST00000207052 1844 ntBASIC14□□□□□ -0.17
RTRAFQ9CQE8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14□□□□□ -0.17
RTRAFQ9CQE8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14□□□□□ -0.17
RTRAFQ9CQE8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RTRAFQ9CQE8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RTRAFQ9CQE8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms