Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Gm10698-201ENSMUST00000182663 604 ntBASIC16.77■□□□□ 0.28
Trim16Q99PP9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim16Q99PP9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim16Q99PP9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trim16Q99PP9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trim16Q99PP9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim16Q99PP9 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.77■□□□□ 0.27
Trim16Q99PP9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Trim16Q99PP9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Trim16Q99PP9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim16Q99PP9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim16Q99PP9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.76■□□□□ 0.27
Trim16Q99PP9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim16Q99PP9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim16Q99PP9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.75■□□□□ 0.27
Trim16Q99PP9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.75■□□□□ 0.27
Trim16Q99PP9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim16Q99PP9 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.75■□□□□ 0.27
Trim16Q99PP9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.74■□□□□ 0.27
Trim16Q99PP9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.74■□□□□ 0.27
Trim16Q99PP9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Gm18025-201ENSMUST00000221733 862 ntBASIC16.74■□□□□ 0.27
Trim16Q99PP9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim16Q99PP9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.73■□□□□ 0.27
Trim16Q99PP9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.73■□□□□ 0.27
Trim16Q99PP9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim16Q99PP9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms