Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clp1Q99LI9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clp1Q99LI9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clp1Q99LI9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.09■□□□□ 0.49
Clp1Q99LI9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clp1Q99LI9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clp1Q99LI9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clp1Q99LI9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clp1Q99LI9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clp1Q99LI9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clp1Q99LI9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Clp1Q99LI9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clp1Q99LI9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clp1Q99LI9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.07■□□□□ 0.48
Clp1Q99LI9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Gm18733-201ENSMUST00000173950 856 ntBASIC18.07■□□□□ 0.48
Clp1Q99LI9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clp1Q99LI9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Clp1Q99LI9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.06■□□□□ 0.48
Clp1Q99LI9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clp1Q99LI9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Gm10052-201ENSMUST00000168019 960 ntBASIC18.05■□□□□ 0.48
Clp1Q99LI9 Gm18195-201ENSMUST00000207604 706 ntBASIC18.05■□□□□ 0.48
Clp1Q99LI9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Gm7729-201ENSMUST00000050143 801 ntBASIC18.05■□□□□ 0.48
Clp1Q99LI9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Clp1Q99LI9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Phf7-203ENSMUST00000226565 1971 ntBASIC18.04■□□□□ 0.48
Clp1Q99LI9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clp1Q99LI9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms