Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.8■□□□□ 0.44
Lysmd3Q99LE3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd3Q99LE3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.8■□□□□ 0.44
Lysmd3Q99LE3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd3Q99LE3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd3Q99LE3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd3Q99LE3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lysmd3Q99LE3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Lysmd3Q99LE3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lysmd3Q99LE3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Lysmd3Q99LE3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lysmd3Q99LE3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Gm10013-201ENSMUST00000106074 672 ntBASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Gm6659-201ENSMUST00000174752 547 ntBASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Gm22697-201ENSMUST00000175194 63 ntBASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Gm18101-201ENSMUST00000215769 548 ntBASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lysmd3Q99LE3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lysmd3Q99LE3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms