Protein–RNA interactions for Protein: Q99J59

Tspan1, Tetraspanin-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan1Q99J59 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tspan1Q99J59 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.03■□□□□ 0.32
Tspan1Q99J59 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.03■□□□□ 0.32
Tspan1Q99J59 Gm7889-201ENSMUST00000185591 958 ntBASIC17.03■□□□□ 0.32
Tspan1Q99J59 Gm45058-201ENSMUST00000205810 766 ntBASIC17.03■□□□□ 0.32
Tspan1Q99J59 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tspan1Q99J59 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.03■□□□□ 0.32
Tspan1Q99J59 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tspan1Q99J59 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tspan1Q99J59 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Tspan1Q99J59 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Gm18958-201ENSMUST00000174258 762 ntBASIC17.02■□□□□ 0.32
Tspan1Q99J59 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.02■□□□□ 0.32
Tspan1Q99J59 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tspan1Q99J59 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.02■□□□□ 0.32
Tspan1Q99J59 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tspan1Q99J59 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Tspan1Q99J59 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.01■□□□□ 0.31
Tspan1Q99J59 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tspan1Q99J59 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Tspan1Q99J59 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17■□□□□ 0.31
Tspan1Q99J59 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Tspan1Q99J59 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Mir5130-201ENSMUST00000175160 84 ntBASIC17■□□□□ 0.31
Tspan1Q99J59 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17■□□□□ 0.31
Tspan1Q99J59 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17■□□□□ 0.31
Tspan1Q99J59 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17■□□□□ 0.31
Tspan1Q99J59 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Tspan1Q99J59 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17■□□□□ 0.31
Tspan1Q99J59 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17■□□□□ 0.31
Tspan1Q99J59 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Tspan1Q99J59 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Tspan1Q99J59 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.99■□□□□ 0.31
Tspan1Q99J59 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Gm9987-201ENSMUST00000069768 567 ntBASIC16.99■□□□□ 0.31
Tspan1Q99J59 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tspan1Q99J59 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.99■□□□□ 0.31
Tspan1Q99J59 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms