Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Col20a1Q923P0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col20a1Q923P0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Col20a1Q923P0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col20a1Q923P0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col20a1Q923P0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Gm7284-201ENSMUST00000131667 944 ntBASIC20.25■□□□□ 0.83
Col20a1Q923P0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Gm37722-201ENSMUST00000193757 208 ntBASIC20.25■□□□□ 0.83
Col20a1Q923P0 Gm17808-201ENSMUST00000200859 894 ntBASIC20.25■□□□□ 0.83
Col20a1Q923P0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Col20a1Q923P0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col20a1Q923P0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Col20a1Q923P0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col20a1Q923P0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Col20a1Q923P0 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.23■□□□□ 0.83
Col20a1Q923P0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col20a1Q923P0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col20a1Q923P0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.22■□□□□ 0.83
Col20a1Q923P0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col20a1Q923P0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Gm11950-201ENSMUST00000121615 838 ntBASIC20.21■□□□□ 0.83
Col20a1Q923P0 Gm27704-201ENSMUST00000185094 107 ntBASIC20.21■□□□□ 0.83
Col20a1Q923P0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col20a1Q923P0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col20a1Q923P0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.2■□□□□ 0.82
Col20a1Q923P0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col20a1Q923P0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms