Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Gm42778-201ENSMUST00000199644 553 ntBASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Gm29791-202ENSMUST00000207888 369 ntBASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp1aQ921W0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp1aQ921W0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Mir8112-201ENSMUST00000184382 131 ntBASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Chmp1aQ921W0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.15■□□□□ 0.02
Chmp1aQ921W0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms