Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Gm16061-201ENSMUST00000122167 857 ntBASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha11Q91Y19 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdha11Q91Y19 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha11Q91Y19 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha11Q91Y19 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdha11Q91Y19 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha11Q91Y19 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha11Q91Y19 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Gm13474-201ENSMUST00000122466 815 ntBASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha11Q91Y19 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18■□□□□ 0.47
Pcdha11Q91Y19 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdha11Q91Y19 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdha11Q91Y19 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18■□□□□ 0.47
Pcdha11Q91Y19 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdha11Q91Y19 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdha11Q91Y19 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha11Q91Y19 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pcdha11Q91Y19 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha11Q91Y19 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdha11Q91Y19 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Gm18958-201ENSMUST00000174258 762 ntBASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Gm7977-201ENSMUST00000193787 748 ntBASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Gm7370-201ENSMUST00000219471 767 ntBASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha11Q91Y19 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms