Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb18Q91Y02 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb18Q91Y02 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Gm29518-201ENSMUST00000190858 372 ntBASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb18Q91Y02 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Gm11355-201ENSMUST00000121120 306 ntBASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb18Q91Y02 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb18Q91Y02 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb18Q91Y02 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb18Q91Y02 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb18Q91Y02 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdhb18Q91Y02 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms