Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Gm10231-201ENSMUST00000181584 441 ntBASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Gm10175-202ENSMUST00000208752 441 ntBASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb20Q91XZ9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb20Q91XZ9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Gm8969-201ENSMUST00000199694 526 ntBASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Gm45058-201ENSMUST00000205810 766 ntBASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb20Q91XZ9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb20Q91XZ9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb20Q91XZ9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb20Q91XZ9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb20Q91XZ9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Pcdhb20Q91XZ9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb20Q91XZ9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb20Q91XZ9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Gm13474-201ENSMUST00000122466 815 ntBASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Mir5130-201ENSMUST00000175160 84 ntBASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb20Q91XZ9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms