Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Gm11643-201ENSMUST00000119578 864 ntBASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Gm20049-201ENSMUST00000219950 730 ntBASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Gm13158-201ENSMUST00000122007 736 ntBASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Gm27275-201ENSMUST00000184318 272 ntBASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb4Q91XZ6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb4Q91XZ6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb4Q91XZ6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb4Q91XZ6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdhb4Q91XZ6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms