Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb5Q91XZ5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Gm27000-201ENSMUST00000182943 842 ntBASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb5Q91XZ5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Gm27357-201ENSMUST00000183754 135 ntBASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb5Q91XZ5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb5Q91XZ5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb5Q91XZ5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Gm7153-201ENSMUST00000117092 455 ntBASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Olfr129-201ENSMUST00000122318 993 ntBASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb5Q91XZ5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb5Q91XZ5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms