Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Mir3081-201ENSMUST00000175305 84 ntBASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 BC021767-201ENSMUST00000126387 1716 ntBASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga6Q91XY2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga6Q91XY2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga6Q91XY2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga6Q91XY2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga6Q91XY2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga6Q91XY2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhga6Q91XY2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga6Q91XY2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga6Q91XY2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Gm24589-201ENSMUST00000116692 94 ntBASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.01■□□□□ 0.31
Pcdhga6Q91XY2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Gm27357-201ENSMUST00000183754 135 ntBASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhga6Q91XY2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms