Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga9Q91XX9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga9Q91XX9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 Gm3375-201ENSMUST00000203929 796 ntBASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga9Q91XX9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhga9Q91XX9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhga9Q91XX9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhga9Q91XX9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga9Q91XX9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms