Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhgc3Q91XX1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Gm8495-201ENSMUST00000188740 694 ntBASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgc3Q91XX1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhgc3Q91XX1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgc3Q91XX1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhgc3Q91XX1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhgc3Q91XX1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhgc3Q91XX1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgc3Q91XX1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgc3Q91XX1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms