Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Gm12439-201ENSMUST00000117162 365 ntBASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb17Q91VD8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Gm43799-201ENSMUST00000201845 579 ntBASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb17Q91VD8 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.77■□□□□ 0.43
Pcdhb17Q91VD8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhb17Q91VD8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhb17Q91VD8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb17Q91VD8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.76■□□□□ 0.43
Pcdhb17Q91VD8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.75■□□□□ 0.43
Pcdhb17Q91VD8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms